ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4e6wB2 - ECOD Domain | ECOD

ECOD/Domains/e4e6wB2

e4e6wB2

UID: 000868856

PDB

Range: B:41-90,B:264-375
PDB: 4E6W chain B(all domains)
UniProt: Q8FGC8 (all domains)

Molecule: ClbP peptidase

3D Structure

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Related Domains

Browse other domains in Beta-lactamase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyBeta-lactamase(223.3.1.1)

Ligands

in contact, ≤ 4 Å

M-Aminophenylboronic AcidAPB
drugDrugBank DB01896

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer.

Pfam Families

PF00144Beta-lactamase

Beta-lactamase

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 4E6W RCSB PDB: 4E6W PDBe: 4E6W UniProt: Q8FGC8

Downloads

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Drug annotations from DrugDomain.