ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3d29H1 - ECOD Domain | ECOD

ECOD/Domains/e3d29H1

e3d29H1

UID: 000086892

PDB

Range: H:1-223
PDB: 3D29 chain H(all domains)
UniProt: P25043 (all domains)
Gene: PUP1

Molecule: proteasome endopeptidase complex

3D Structure

Loading viewer...

Related Domains

Browse other domains in Proteasome,Pr_beta_C →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome,Pr_beta_C(210.1.1.3)

Ligands

in contact, ≤ 4 Å

(3R)-3-HYDROXYDODECANOIC ACIDHXD
drugDrugBank DB07930

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

PF12465Pr_beta_C

Proteasome beta subunits C terminal

External Links

ECOD PDB View: 3D29 RCSB PDB: 3D29 PDBe: 3D29 UniProt: P25043

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure