ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1m65A1 - ECOD Domain | ECOD

ECOD/Domains/e1m65A1

e1m65A1

UID: 000008707

RepresentativePDB

Range: A:2-245
PDB: 1M65 chain A(all domains)
UniProt: P75914 (all domains)
Gene: ycdX

Molecule: Hypothetical protein ycdX

3D Structure

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Related Domains

Browse other domains in PHP →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPHP(2002.1.1.102)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

PHP domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1M65 RCSB PDB: 1M65 PDBe: 1M65 UniProt: P75914

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.