ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1jubA1 - ECOD Domain | ECOD

ECOD/Domains/e1jubA1

e1jubA1

UID: 000008719

RepresentativePDB

Range: A:1-311
PDB: 1JUB chain A(all domains)
UniProt: A2RJT9 (all domains)
Gene: pyrDA

Molecule: dihydroorotate dehydrogenase A

3D Structure

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Related Domains

Browse other domains in DHO_dh →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDHO_dh(2002.1.1.54)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247
Magnesium ionMG
metal

+ 1 additive (Glycerin)

Pfam Families

Dihydroorotate dehydrogenase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1JUB RCSB PDB: 1JUB PDBe: 1JUB UniProt: A2RJT9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Glycerin

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.