ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vcfA1 - ECOD Domain | ECOD

ECOD/Domains/e1vcfA1

e1vcfA1

UID: 000008733

RepresentativePDB

Range: A:23-332
PDB: 1VCF chain A(all domains)
UniProt: Q746I8 (all domains)
Gene: fni

Molecule: isopentenyl-diphosphate delta-isomerase

3D Structure

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Related Domains

Browse other domains in FMN_dh →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyFMN_dh(2002.1.1.48)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247
Cadmium ionCD
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

FMN-dependent dehydrogenase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1VCF RCSB PDB: 1VCF PDBe: 1VCF UniProt: Q746I8

Downloads

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