ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vdcE3 - ECOD Domain | ECOD

ECOD/Domains/e2vdcE3

e2vdcE3

UID: 000087508

PDB

Range: E:1-65,E:174-422
PDB: 2VDC chain E(all domains)
UniProt: Q05755 (all domains)
Gene: gltB

Molecule: GLUTAMATE SYNTHASE [NADPH] LARGE CHAIN

3D Structure

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Related Domains

Browse other domains in GATase_2 →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupClass II glutamine amidotransferases(210.1.3)

FFamilyGATase_2(210.1.3.1)

Ligands

in contact, ≤ 4 Å

L-methionine sulfoneOMT
drugDrugBank DB03790
Iron/sulfur clusterSF4
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00310GATase_2

Glutamine amidotransferases class-II

ClanCL0052NTN

External Links

ECOD PDB View: 2VDC RCSB PDB: 2VDC PDBe: 2VDC UniProt: Q05755

Downloads

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