ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1bixA1 - ECOD Domain | ECOD

ECOD/Domains/e1bixA1

e1bixA1

UID: 000087730

PDB

Range: A:44-318
PDB: 1BIX chain A(all domains)
UniProt: P27695 (all domains)
Gene: APEX1

Molecule: AP ENDONUCLEASE 1

3D Structure

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Related Domains

Browse other domains in Exo_endo_phos →

Classification

AArchitecturea+b four layers(a.13)

XX-groupCarbon-nitrogen hydrolase-like(246)

HH-groupDNase I-like(246.3)

TT-groupDNase I-like(246.3.1)

FFamilyExo_endo_phos(246.3.1.1)

Ligands

in contact, ≤ 4 Å

PLATINUM (II) IONPT
metal
SAMARIUM (III) IONSM
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03372Exo_endo_phos

Endonuclease/Exonuclease/phosphatase family

ClanCL0530DNase_I-like

External Links

ECOD PDB View: 1BIX RCSB PDB: 1BIX PDBe: 1BIX UniProt: P27695

Downloads

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