ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vliA2 - ECOD Domain | ECOD

ECOD/Domains/e1vliA2

e1vliA2

UID: 000008778

RepresentativePDB

Range: A:2-296
PDB: 1VLI chain A(all domains)
UniProt: P39625 (all domains)
Gene: spsE

Molecule: Spore coat polysaccharide biosynthesis protein spsE

3D Structure

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Related Domains

Browse other domains in NeuB →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyNeuB(2002.1.1.109)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

NeuB family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1VLI RCSB PDB: 1VLI PDBe: 1VLI UniProt: P39625

Downloads

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