ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1n2mF1 - ECOD Domain | ECOD

ECOD/Domains/e1n2mF1

e1n2mF1

UID: 000087904

PDB

Range: F:13-165
PDB: 1N2M chain F(all domains)
UniProt: Q57764 (all domains)
Gene: pdaD

Molecule: Pyruvoyl-dependent arginine decarboxylase

3D Structure

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Related Domains

Browse other domains in PvlArgDC →

Classification

AArchitecturea+b four layers(a.13)

XX-groupPyruvoyl-dependent histidine and arginine decarboxylases(303)

HH-groupPyruvoyl-dependent histidine and arginine decarboxylases(303.1)

TT-groupPyruvoyl-dependent histidine and arginine decarboxylases(303.1.1)

FFamilyPvlArgDC(303.1.1.1)

Ligands

in contact, ≤ 4 Å

(4R)-2-METHYLPENTANE-2,4-DIOLMRD

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01862PvlArgDC

Pyruvoyl-dependent arginine decarboxylase (PvlArgDC)

External Links

ECOD PDB View: 1N2M RCSB PDB: 1N2M PDBe: 1N2M UniProt: Q57764

Downloads

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