ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1thqA1 - ECOD Domain | ECOD

ECOD/Domains/e1thqA1

e1thqA1

UID: 000000880

RepresentativePDB

Range: A:7-163
PDB: 1THQ chain A(all domains)
UniProt: P37001 (all domains)
Gene: pagP

Molecule: CrcA protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in PagP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupOMPA-like(5084.1)

TT-groupOMPA-like(5084.1.1)

FFamilyPagP(5084.1.1.7)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Acetate, Dodecyldimethylamine N-oxide, (4S)-2-METHYL-2,4-PENTANEDIOL)

AcetateACT
DrugBank DB14511
Dodecyldimethylamine N-oxideLDA
DrugBank DB04147

Pfam Families

Antimicrobial peptide resistance and lipid A acylation protein PagP

ClanCL0193MBB

External Links

ECOD PDB View: 1THQ RCSB PDB: 1THQ PDBe: 1THQ UniProt: P37001

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(4S)-2-METHYL-2,4-PENTANEDIOL

Shown in the structure viewer. Drug annotations from DrugDomain.