ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1qnrA1 - ECOD Domain | ECOD

ECOD/Domains/e1qnrA1

e1qnrA1

UID: 000008842

RepresentativePDB

Range: A:1-344
PDB: 1QNR chain A(all domains)
UniProt: Q99036 (all domains)
Gene: man1

Molecule: ENDO-1,4-B-D-MANNANASE

3D Structure

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Related Domains

Browse other domains in GH5_mannosidase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGH5_mannosidase(2002.1.1.254)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF26410GH5_mannosidase

GH family 5 beta-mannosidase-like

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1QNR RCSB PDB: 1QNR PDBe: 1QNR UniProt: Q99036

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.