ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1eokA1 - ECOD Domain | ECOD

ECOD/Domains/e1eokA1

e1eokA1

UID: 000008872

RepresentativePDB

Range: A:8-289
PDB: 1EOK chain A(all domains)
UniProt: P36913 (all domains)
Gene: endOF3

Molecule: ENDO-BETA-N-ACETYLGLUCOSAMINIDASE F3

3D Structure

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Related Domains

Browse other domains in TIM-barrel_EndoS →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyTIM-barrel_EndoS(2002.1.1.238)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF23916TIM-barrel_EndoS

Endo-beta-N-acetylglucosaminidase EndoS TIM-barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1EOK RCSB PDB: 1EOK PDBe: 1EOK UniProt: P36913

Downloads

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