ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vfsA2 - ECOD Domain | ECOD

ECOD/Domains/e1vfsA2

e1vfsA2

UID: 000008901

RepresentativePDB

Range: A:13-249
PDB: 1VFS chain A(all domains)
UniProt: Q65YW7 (all domains)
Gene: alr

Molecule: alanine racemase

3D Structure

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Related Domains

Browse other domains in Ala_racemase_N →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAla_racemase_N(2002.1.1.53)

Ligands

in contact, ≤ 4 Å

D-[3-hydroxy-2-methyl-5-phosphonooxymethyl-pyridin-4-ylmethyl]-N,O-cycloserylamideDCS
drugDrugBank DB02038
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01168Ala_racemase_N

Alanine racemase, N-terminal domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1VFS RCSB PDB: 1VFS PDBe: 1VFS UniProt: Q65YW7

Downloads

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