ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2hmkA3 - ECOD Domain | ECOD

ECOD/Domains/e2hmkA3

e2hmkA3

UID: 000089346

PDB

Range: A:79-134
PDB: 2HMK chain A(all domains)
UniProt: P0A111 (all domains)
Gene: doxB

Molecule: Naphthalene 1,2-dioxygenase alpha subunit

3D Structure

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Related Domains

Browse other domains in Rieske →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupTrm112p-like(4294)

HH-groupTrm112p-like(4294.1)

TT-groupTrm112p-like(4294.1.1)

FFamilyRieske(4294.1.1.1)

Ligands

in contact, ≤ 4 Å

FE2/S2 (INORGANIC) CLUSTERFES

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO

Shown in the structure viewer.

Pfam Families

Rieske [2Fe-2S] domain

ClanCL0516ISP-domain

External Links

ECOD PDB View: 2HMK RCSB PDB: 2HMK PDBe: 2HMK UniProt: P0A111

Downloads

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Drug annotations from DrugDomain.