ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vnfA1 - ECOD Domain | ECOD

ECOD/Domains/e2vnfA1

e2vnfA1

UID: 000089469

PDB

Range: A:195-244
PDB: 2VNF chain A(all domains)
UniProt: Q9UNL4 (all domains)
Gene: ING4

Molecule: INHIBITOR OF GROWTH PROTEIN 4

3D Structure

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Related Domains

Browse other domains in PHD-1st_NSD →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD-1st_NSD(376.1.3.25)

Ligands

in contact, ≤ 4 Å

1,4-DithiothreitolDTT
drugDrugBank DB04447
Sodium ionNA
metal
Zinc ionZN

Pfam Families

PF23011PHD-1st_NSD

Histone-lysine N-methyltransferase NSD-like, PHD zinc finger 1

ClanCL0229RING

External Links

ECOD PDB View: 2VNF RCSB PDB: 2VNF PDBe: 2VNF UniProt: Q9UNL4

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.