ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ga5B1 - ECOD Domain | ECOD

ECOD/Domains/e1ga5B1

e1ga5B1

UID: 000089656

PDB

Range: B:0-74
PDB: 1GA5 chain B(all domains)
UniProt: P20393 (all domains)
Gene: NR1D1

Molecule: ORPHAN NUCLEAR RECEPTOR NR1D1

3D Structure

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Related Domains

Browse other domains in zf-C4 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupGlucocorticoid receptor-like(377)

HH-groupLIM domain-like(377.1)

TT-groupLIM domain-like(377.1.1)

FFamilyzf-C4(377.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Double treble clef zinc finger, C4 type

ClanCL0839Tbcl_zf

External Links

ECOD PDB View: 1GA5 RCSB PDB: 1GA5 PDBe: 1GA5 UniProt: P20393

Downloads

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