ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ds5B1 - ECOD Domain | ECOD

ECOD/Domains/e2ds5B1

e2ds5B1

UID: 000089703

PDB

Range: B:11-48
PDB: 2DS5 chain B(all domains)
UniProt: P0A6H1 (all domains)
Gene: clpX

Molecule: ATP-dependent Clp protease ATP-binding subunit clpX

3D Structure

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Related Domains

Browse other domains in zf-C4_ClpX →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupGlucocorticoid receptor-like(377)

HH-groupLIM domain-like(377.1)

TT-groupLIM domain-like(377.1.1)

FFamilyzf-C4_ClpX(377.1.1.17)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal
Calcium ionCA
metalwithin 5 Å only

+ 1 additive (Tetraethylene glycol)

Tetraethylene glycol

Pfam Families

PF06689zf-C4_ClpX

ClpX C4-type zinc finger

ClanCL0839Tbcl_zf

External Links

ECOD PDB View: 2DS5 RCSB PDB: 2DS5 PDBe: 2DS5 UniProt: P0A6H1

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.