ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ywhI1 - ECOD Domain | ECOD

ECOD/Domains/e1ywhI1

e1ywhI1

UID: 000090339

PDB

Range: I:1-80
PDB: 1YWH chain I(all domains)
UniProt: Q03405 (all domains)
Gene: PLAUR

Molecule: Urokinase plasminogen activator surface receptor

3D Structure

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Related Domains

Browse other domains in UPAR_LY6 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupSnake toxin-like(382)

HH-groupSnake toxin-like(382.1)

TT-groupSnake toxin-like(382.1.1)

FFamilyUPAR_LY6(382.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

PF00021UPAR_LY6

u-PAR/Ly-6 domain

ClanCL0117uPAR_Ly6_toxin

External Links

ECOD PDB View: 1YWH RCSB PDB: 1YWH PDBe: 1YWH UniProt: Q03405

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.