ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1r6dA1 - ECOD Domain | ECOD

ECOD/Domains/e1r6dA1

e1r6dA1

UID: 000009038

RepresentativePDB

Range: A:1-322
PDB: 1R6D chain A(all domains)
UniProt: Q9ZGH3 (all domains)
Gene: desIV

Molecule: TDP-glucose-4,6-dehydratase

3D Structure

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Related Domains

Browse other domains in GDP_Man_Dehyd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyGDP_Man_Dehyd(2003.1.1.72)

Ligands

in contact, ≤ 4 Å

2'deoxy-Thymidine-5'-Diphospho-Alpha-D-GlucoseDAU
drugDrugBank DB03751
NadideNAD
drugDrugBank DB14128

Shown in the structure viewer.

Pfam Families

PF16363GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1R6D RCSB PDB: 1R6D PDBe: 1R6D UniProt: Q9ZGH3

Downloads

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Drug annotations from DrugDomain.