ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1n2sA1 - ECOD Domain | ECOD

ECOD/Domains/e1n2sA1

e1n2sA1

UID: 000009039

RepresentativePDB

Range: A:1-298
PDB: 1N2S chain A(all domains)
UniProt: P26392 (all domains)
Gene: rfbD

Molecule: dTDP-glucose oxidoreductase

3D Structure

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Related Domains

Browse other domains in RmlD_sub_bind →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyRmlD_sub_bind(2003.1.1.52)

Ligands

in contact, ≤ 4 Å

NADHNAI
drugDrugBank DB00157within 5 Å only
Magnesium ionMG
metal

+ 1 additive (Tromethamine)

Pfam Families

PF04321RmlD_sub_bind

RmlD substrate binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1N2S RCSB PDB: 1N2S PDBe: 1N2S UniProt: P26392

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

TromethamineTRS

DrugBank DB03754within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.