ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vy5A1 - ECOD Domain | ECOD

ECOD/Domains/e2vy5A1

e2vy5A1

UID: 000090844

PDB

Range: A:53-87
PDB: 2VY5 chain A(all domains)
UniProt: Q6IEG0 (all domains)
Gene: SNRNP48

Molecule: U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 48 KDA PROTEIN

3D Structure

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Related Domains

Browse other domains in zf-U11-48K →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyzf-U11-48K(386.1.1.7)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05253zf-U11-48K

U11-48K-like CHHC zinc finger

ClanCL0361C2H2-zf

External Links

ECOD PDB View: 2VY5 RCSB PDB: 2VY5 PDBe: 2VY5 UniProt: Q6IEG0

Downloads

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