ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1nvmB2 - ECOD Domain | ECOD

ECOD/Domains/e1nvmB2

e1nvmB2

UID: 000009114

RepresentativePDB

Range: B:1-131,B:287-312
PDB: 1NVM chain B(all domains)
UniProt: Q52060 (all domains)
Gene: dmpF

Molecule: acetaldehyde dehydrogenase (acylating)

3D Structure

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Related Domains

Browse other domains in Semialdhyde_dh →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilySemialdhyde_dh(2003.1.1.15)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Pfam Families

PF01118Semialdhyde_dh

Semialdehyde dehydrogenase, NAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1NVM RCSB PDB: 1NVM PDBe: 1NVM UniProt: Q52060

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.