ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ok3B4 - ECOD Domain | ECOD

ECOD/Domains/e1ok3B4

e1ok3B4

UID: 000091650

PDB

Range: B:65-128
PDB: 1OK3 chain B(all domains)
UniProt: P08174 (all domains)
Gene: CD55

Molecule: COMPLEMENT DECAY-ACCELERATING FACTOR

3D Structure

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Related Domains

Browse other domains in Sushi →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupEGF-related(389.1)

TT-groupComplement control module/SCR domain(389.1.2)

FFamilySushi(389.1.2.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Acetate, Sulfate ion, Glycerol)

AcetateACT
DrugBank DB14511
Sulfate ionSO4
DrugBank DB14546
Glycerol

Pfam Families

Sushi repeat (SCR repeat)

ClanCL0001EGF

External Links

ECOD PDB View: 1OK3 RCSB PDB: 1OK3 PDBe: 1OK3 UniProt: P08174

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.