ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1extB1 - ECOD Domain | ECOD

ECOD/Domains/e1extB1

e1extB1

UID: 000091693

PDB

Range: B:13-71
PDB: 1EXT chain B(all domains)
UniProt: P19438 (all domains)
Gene: TNFRSF1A

Molecule: TUMOR NECROSIS FACTOR RECEPTOR

3D Structure

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Related Domains

Browse other domains in TNFR_c6 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupEGF-related(389.1)

TT-groupTNF receptor-like(389.1.3)

FFamilyTNFR_c6(389.1.3.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00020TNFR_c6

TNFR/NGFR cysteine-rich region

ClanCL0607TNF_receptor

External Links

ECOD PDB View: 1EXT RCSB PDB: 1EXT PDBe: 1EXT UniProt: P19438

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