ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1cl4A1 - ECOD Domain | ECOD

ECOD/Domains/e1cl4A1

e1cl4A1

UID: 000091962

PDB

Range: A:49-79
PDB: 1CL4 chain A(all domains)
UniProt: P07567 (all domains)
Gene: gag

Molecule: PROTEIN (GAG POLYPROTEIN)

3D Structure

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Related Domains

Browse other domains in zf-CCHC_5 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCCHC-type 1 zinc finger(396)

HH-groupRetrovirus zinc finger-related domains(396.1)

TT-groupRetrovirus zinc finger-related domains(396.1.1)

FFamilyzf-CCHC_5(396.1.1.4)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF14787zf-CCHC_5

GAG-polyprotein viral zinc-finger

ClanCL0511Retroviral_zf

External Links

ECOD PDB View: 1CL4 RCSB PDB: 1CL4 PDBe: 1CL4 UniProt: P07567

Downloads

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