ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1ogyD1 - ECOD Domain | ECOD

ECOD/Domains/e1ogyD1

e1ogyD1

UID: 000092257

PDB

Range: D:2-128
PDB: 1OGY chain D(all domains)
UniProt: Q53177 (all domains)
Gene: napB

Molecule: DIHEME CYTOCHROME C NAPB MOLECULE: NITRATE REDUCTASE

3D Structure

Loading viewer...

Related Domains

Browse other domains in NapB →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupMultiheme cytochromes(139)

HH-groupDi-heme elbow motif(139.2)

TT-groupDi-heme elbow motif(139.2.1)

FFamilyNapB(139.2.1.3)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Nitrate reductase cytochrome c-type subunit (NapB)

ClanCL0317Multiheme_cytos

External Links

ECOD PDB View: 1OGY RCSB PDB: 1OGY PDBe: 1OGY UniProt: Q53177

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure