ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4reqA1 - ECOD Domain | ECOD

ECOD/Domains/e4reqA1

e4reqA1

UID: 000092345

PDB

Range: A:4-560
PDB: 4REQ chain A(all domains)
UniProt: P11653 (all domains)
Gene: mutB

Molecule: METHYLMALONYL-COA MUTASE

3D Structure

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Related Domains

Browse other domains in MM_CoA_mutase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyMM_CoA_mutase(2002.1.1.69)

Ligands

in contact, ≤ 4 Å

(R)-methylmalonyl-CoAMCA
drugDrugBank DB04045
Succinyl-Coenzyme ASCA
drugDrugBank DB03699

Pfam Families

PF01642MM_CoA_mutase

Methylmalonyl-CoA mutase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4REQ RCSB PDB: 4REQ PDBe: 4REQ UniProt: P11653

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

5'-DEOXYADENOSINE

CobalaminB12

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.