ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2gmhA3 - ECOD Domain | ECOD

ECOD/Domains/e2gmhA3

e2gmhA3

UID: 000009236

RepresentativePDB

Range: A:4-236,A:336-482
PDB: 2GMH chain A(all domains)
UniProt: P55931 (all domains)
Gene: ETFDH

Molecule: Electron transfer flavoprotein-ubiquinone oxidoreductase

3D Structure

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Related Domains

Browse other domains in Pyridine nucleotide-disulphide oxidoreductase / NAD(P)-binding Rossmann-like domain →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyPyridine nucleotide-disulphide oxidoreductase / NAD(P)-binding Rossmann-like domain(2003.1.2.25)

Ligands

in contact, ≤ 4 Å

2-Hexyloxy-6-Hydroxymethyl-Tetrahydro-Pyran-3,4,5-TriolBHG
drugDrugBank DB04141
Flavin adenine dinucleotideFAD
drugDrugBank DB03147

Pfam Families

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

PF13450NAD_binding_8

NAD(P)-binding Rossmann-like domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2GMH RCSB PDB: 2GMH PDBe: 2GMH UniProt: P55931

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sodium ionNA

metal

2,3-DIMETHOXY-5-METHYL-6-(3,11,15,19-TETRAMETHYL-EICOSA-2,6,10,14,18-PENTAENYL)-[1,4]BENZOQUINONEUQ5

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.