ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vbgA2 - ECOD Domain | ECOD

ECOD/Domains/e1vbgA2

e1vbgA2

UID: 000092480

PDB

Range: A:521-876
PDB: 1VBG chain A(all domains)
UniProt: P11155 (all domains)
Gene: PPDK1

Molecule: pyruvate,orthophosphate dikinase

3D Structure

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Related Domains

Browse other domains in PEP-utilizers_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPEP-utilizers_C(2002.1.1.105)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02896PEP-utilizers_C

PEP-utilising enzyme, PEP-binding domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1VBG RCSB PDB: 1VBG PDBe: 1VBG UniProt: P11155

Downloads

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