ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2lo4A1 - ECOD Domain | ECOD

ECOD/Domains/e2lo4A1

e2lo4A1

UID: 000928562

RepresentativePDB

Range: A:24-51
PDB: 2LO4 chain A(all domains)
UniProt: Q96CV9 (all domains)
Gene: OPTN

Molecule: Optineurin

3D Structure

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Related Domains

Browse other domains in zf_C2H2_10 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyzf_C2H2_10(386.1.1.43)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18414zf_C2H2_10

C2H2 type zinc-finger

ClanCL0361C2H2-zf

External Links

ECOD PDB View: 2LO4 RCSB PDB: 2LO4 PDBe: 2LO4 UniProt: Q96CV9

Downloads

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