ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1p0kB1 - ECOD Domain | ECOD

ECOD/Domains/e1p0kB1

e1p0kB1

UID: 000093121

PDB

Range: B:22-349
PDB: 1P0K chain B(all domains)
UniProt: P50740 (all domains)
Gene: fni

Molecule: Isopentenyl-diphosphate delta-isomerase

3D Structure

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Related Domains

Browse other domains in FMN_dh →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyFMN_dh(2002.1.1.48)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

FMN-dependent dehydrogenase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1P0K RCSB PDB: 1P0K PDBe: 1P0K UniProt: P50740

Downloads

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