ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2p41A1 - ECOD Domain | ECOD

ECOD/Domains/e2p41A1

e2p41A1

UID: 000009333

RepresentativePDB

Range: A:8-264
PDB: 2P41 chain A(all domains)
UniProt: Q9WLZ5 (all domains)
Gene: DENPoly

Molecule: type II methyltransferase

3D Structure

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Related Domains

Browse other domains in FtsJ →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyFtsJ(2003.1.5.15)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-(2'-O-METHYL)-GUANOSINEG1G

+ 3 additives (Citric acid, Glycerin, Sulfate ion)

Pfam Families

FtsJ-like methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2P41 RCSB PDB: 2P41 PDBe: 2P41 UniProt: Q9WLZ5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Citric acid

DrugBank DB04272

GlycerinGOL

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.