ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1booA1 - ECOD Domain | ECOD

ECOD/Domains/e1booA1

e1booA1

UID: 000009375

RepresentativePDB

Range: A:16-178,A:217-335
PDB: 1BOO chain A(all domains)
UniProt: P11409 (all domains)
Gene: pvuIIM

Molecule: PROTEIN (N-4 CYTOSINE-SPECIFIC METHYLTRANSFERASE PVU II)

3D Structure

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Related Domains

Browse other domains in N6_N4_Mtase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyN6_N4_Mtase(2003.1.5.12)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01555N6_N4_Mtase

DNA methylase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1BOO RCSB PDB: 1BOO PDBe: 1BOO UniProt: P11409

Downloads

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