ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1xxlA1 - ECOD Domain | ECOD

ECOD/Domains/e1xxlA1

e1xxlA1

UID: 000009388

RepresentativePDB

Range: A:-3-230
PDB: 1XXL chain A(all domains)
UniProt: O31474 (all domains)
Gene: ycgJ

Molecule: YcgJ protein

3D Structure

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Related Domains

Browse other domains in Methyltransf_29, Methyltransf_11 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_29, Methyltransf_11(2003.1.5.154)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03141Methyltransf_29

Putative S-adenosyl-L-methionine-dependent methyltransferase

ClanCL0063NADP_Rossmann

PF08241Methyltransf_11

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1XXL RCSB PDB: 1XXL PDBe: 1XXL UniProt: O31474

Downloads

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