ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1d9eB1 - ECOD Domain | ECOD

ECOD/Domains/e1d9eB1

e1d9eB1

UID: 000093889

PDB

Range: B:2017-2281
PDB: 1D9E chain B(all domains)
UniProt: P0A715 (all domains)
Gene: kdsA

Molecule: 3-DEOXY-D-MANNO-OCTULOSONATE 8-PHOSPHATE SYNTHASE

3D Structure

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Related Domains

Browse other domains in DAHP_synth_1 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDAHP_synth_1(2002.1.1.35)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00793DAHP_synth_1

DAHP synthetase I family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1D9E RCSB PDB: 1D9E PDBe: 1D9E UniProt: P0A715

Downloads

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