ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ixnC1 - ECOD Domain | ECOD

ECOD/Domains/e1ixnC1

e1ixnC1

UID: 000093946

PDB

Range: C:2-243
PDB: 1IXN chain C(all domains)
UniProt: P0A794 (all domains)
Gene: pdxJ

Molecule: Pyridoxine 5'-Phosphate Synthase

3D Structure

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Related Domains

Browse other domains in PdxJ →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPdxJ(2002.1.1.116)

Ligands

in contact, ≤ 4 Å

1-Deoxy-D-xylulose 5-phosphateDXP
drugDrugBank DB02496
sn-glycerol 3-phosphateG3P
drugDrugBank DB02515

Shown in the structure viewer.

Pfam Families

Pyridoxal phosphate biosynthesis protein PdxJ

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1IXN RCSB PDB: 1IXN PDBe: 1IXN UniProt: P0A794

Downloads

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Drug annotations from DrugDomain.