ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ximD1 - ECOD Domain | ECOD

ECOD/Domains/e1ximD1

e1ximD1

UID: 000094022

PDB

Range: D:3-394
PDB: 1XIM chain D(all domains)
UniProt: P12851 (all domains)
Gene: xylA

Molecule: D-XYLOSE ISOMERASE

3D Structure

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Related Domains

Browse other domains in AP_endonuc_2 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAP_endonuc_2(2002.1.1.60)

Ligands

in contact, ≤ 4 Å

COBALT (II) IONCO
metal

+ 1 additive (Xylitol)

XylitolXYL
DrugBank DB11195

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01261AP_endonuc_2

Xylose isomerase-like TIM barrel

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1XIM RCSB PDB: 1XIM PDBe: 1XIM UniProt: P12851

Downloads

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