ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1a47A4 - ECOD Domain | ECOD

ECOD/Domains/e1a47A4

e1a47A4

UID: 000094225

PDB

Range: A:1-406
PDB: 1A47 chain A(all domains)
UniProt: P26827 (all domains)
Gene: amyA

Molecule: CYCLODEXTRIN GLYCOSYLTRANSFERASE

3D Structure

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Related Domains

Browse other domains in Alpha-amylase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAlpha-amylase(2002.1.1.4)

Ligands

in contact, ≤ 4 Å

1-Amino-2,3-Dihydroxy-5-Hydroxymethyl Cyclohex-5-EneADH
drugDrugBank DB01789within 5 Å only
Calcium ionCA
metal

Shown in the structure viewer.

Pfam Families

PF00128Alpha-amylase

Alpha amylase, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1A47 RCSB PDB: 1A47 PDBe: 1A47 UniProt: P26827

Downloads

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Drug annotations from DrugDomain.