ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ot1A4 - ECOD Domain | ECOD

ECOD/Domains/e1ot1A4

e1ot1A4

UID: 000094245

PDB

Range: A:1-406
PDB: 1OT1 chain A(all domains)
UniProt: P43379 (all domains)
Gene: cgt

Molecule: Cyclomaltodextrin glucanotransferase

3D Structure

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Related Domains

Browse other domains in Alpha-amylase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAlpha-amylase(2002.1.1.4)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 2 additives (Acetic acid, (4r)-2-Methylpentane-2,4-Diol)

Acetic acidACY
DrugBank DB03166
(4r)-2-Methylpentane-2,4-Diol

Pfam Families

PF00128Alpha-amylase

Alpha amylase, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1OT1 RCSB PDB: 1OT1 PDBe: 1OT1 UniProt: P43379

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.