ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vl1A1 - ECOD Domain | ECOD

ECOD/Domains/e1vl1A1

e1vl1A1

UID: 000009425

RepresentativePDB

Range: A:3-220
PDB: 1VL1 chain A(all domains)
UniProt: Q9X0N8 (all domains)
Gene: pgl

Molecule: 6-phosphogluconolactonase

3D Structure

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Related Domains

Browse other domains in Glucosamine_iso →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNagB/RpiA/CoA transferase-like(2003.1.7)

FFamilyGlucosamine_iso(2003.1.7.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Citric acid)

Citric acidCIT
DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01182Glucosamine_iso

Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1VL1 RCSB PDB: 1VL1 PDBe: 1VL1 UniProt: Q9X0N8

Downloads

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