ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1avaB2 - ECOD Domain | ECOD

ECOD/Domains/e1avaB2

e1avaB2

UID: 000094432

PDB

Range: B:1-345
PDB: 1AVA chain B(all domains)
UniProt: P04063 (all domains)
Gene: AMY1.2

Molecule: BARLEY ALPHA-AMYLASE 2(CV MENUET)

3D Structure

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Related Domains

Browse other domains in Alpha-amylase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAlpha-amylase(2002.1.1.4)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00128Alpha-amylase

Alpha amylase, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1AVA RCSB PDB: 1AVA PDBe: 1AVA UniProt: P04063

Downloads

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