ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1r8lA1 - ECOD Domain | ECOD

ECOD/Domains/e1r8lA1

e1r8lA1

UID: 000094601

PDB

Range: A:11-396
PDB: 1R8L chain A(all domains)
UniProt: Q65CX5 (all domains)
Gene: ganB

Molecule: endo-beta-1,4-galactanase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_53 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_53(2002.1.1.151)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07745Glyco_hydro_53

Glycosyl hydrolase family 53

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1R8L RCSB PDB: 1R8L PDBe: 1R8L UniProt: Q65CX5

Downloads

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