ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1k9dA1 - ECOD Domain | ECOD

ECOD/Domains/e1k9dA1

e1k9dA1

UID: 000095308

PDB

Range: A:143-679
PDB: 1K9D chain A(all domains)
UniProt: Q8VVD2 (all domains)
Gene: aguA

Molecule: alpha-D-glucuronidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_67C,Glyco_hydro_67M →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_67C,Glyco_hydro_67M(2002.1.1.149)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07477Glyco_hydro_67C

Glycosyl hydrolase family 67 C-terminus

PF07488Glyco_hydro_67M

Glycosyl hydrolase family 67 middle domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1K9D RCSB PDB: 1K9D PDBe: 1K9D UniProt: Q8VVD2

Downloads

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