ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2cbiB2 - ECOD Domain | ECOD

ECOD/Domains/e2cbiB2

e2cbiB2

UID: 000095323

PDB

Range: B:179-495
PDB: 2CBI chain B(all domains)
UniProt: Q0TR53 (all domains)
Gene: nagJ

Molecule: HYALURONIDASE

3D Structure

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Related Domains

Browse other domains in NAGidase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyNAGidase(2002.1.1.150)

Ligands

in contact, ≤ 4 Å

gamma-ButyrolactoneGBL
drugDrugBank DB04699
Zinc ionZN
metal

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

PF07555NAGidase

beta-N-acetylglucosaminidase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 2CBI RCSB PDB: 2CBI PDBe: 2CBI UniProt: Q0TR53

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.