ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1twiC2 - ECOD Domain | ECOD

ECOD/Domains/e1twiC2

e1twiC2

UID: 000095420

PDB

Range: C:50-313
PDB: 1TWI chain C(all domains)
UniProt: Q58497 (all domains)
Gene: lysA

Molecule: Diaminopimelate decarboxylase

3D Structure

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Related Domains

Browse other domains in Orn_Arg_deC_N →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyOrn_Arg_deC_N(2002.1.1.101)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114
LysineLYS
Magnesium ionMG
metal

Pfam Families

PF02784Orn_Arg_deC_N

Pyridoxal-dependent decarboxylase, pyridoxal binding domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1TWI RCSB PDB: 1TWI PDBe: 1TWI UniProt: Q58497

Downloads

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within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.