ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8rucE2 - ECOD Domain | ECOD

ECOD/Domains/e8rucE2

e8rucE2

UID: 000095479

PDB

Range: E:151-475
PDB: 8RUC chain E(all domains)
UniProt: P00875 (all domains)
Gene: rbcL

Molecule: RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE

3D Structure

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Related Domains

Browse other domains in RuBisCO_large →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRuBisCO_large(2002.1.1.1)

Ligands

in contact, ≤ 4 Å

2-CARBOXYARABINITOL-1,5-DIPHOSPHATECAP
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00016RuBisCO_large

Ribulose bisphosphate carboxylase large chain, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 8RUC RCSB PDB: 8RUC PDBe: 8RUC UniProt: P00875

Downloads

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