ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1rxoL2 - ECOD Domain | ECOD

ECOD/Domains/e1rxoL2

e1rxoL2

UID: 000095535

PDB

Range: L:151-463
PDB: 1RXO chain L(all domains)
UniProt: P00875 (all domains)
Gene: rbcL

Molecule: RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE

3D Structure

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Related Domains

Browse other domains in RuBisCO_large →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRuBisCO_large(2002.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
RIBULOSE-1,5-DIPHOSPHATERUB

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00016RuBisCO_large

Ribulose bisphosphate carboxylase large chain, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1RXO RCSB PDB: 1RXO PDBe: 1RXO UniProt: P00875

Downloads

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