ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3d9jA1 - ECOD Domain | ECOD

ECOD/Domains/e3d9jA1

e3d9jA1

UID: 000955431

PDB

Range: A:1-136
PDB: 3D9J chain A(all domains)
UniProt: Q9UPN6 (all domains)
Gene: SCAF8

Molecule: RNA-binding protein 16

3D Structure

Loading viewer...

Related Domains

Browse other domains in CID →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyCID(109.4.1.70)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Sulfate ion, Ammonium ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546
Ammonium ion

Pfam Families

CID domain

ClanCL0020TPR

External Links

ECOD PDB View: 3D9J RCSB PDB: 3D9J PDBe: 3D9J UniProt: Q9UPN6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.