ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3d9kA1 - ECOD Domain | ECOD

ECOD/Domains/e3d9kA1

e3d9kA1

UID: 000955433

PDB

Range: A:1-136
PDB: 3D9K chain A(all domains)
UniProt: Q9UPN6 (all domains)
Gene: SCAF8

Molecule: RNA-binding protein 16

3D Structure

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Related Domains

Browse other domains in CID →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyCID(109.4.1.70)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

CID domain

ClanCL0020TPR

External Links

ECOD PDB View: 3D9K RCSB PDB: 3D9K PDBe: 3D9K UniProt: Q9UPN6

Downloads

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