ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3rubL2 - ECOD Domain | ECOD

ECOD/Domains/e3rubL2

e3rubL2

UID: 000095604

PDB

Range: L:151-467
PDB: 3RUB chain L(all domains)
UniProt: P00876 (all domains)
Gene: rbcL

Molecule: RIBULOSE 1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE, FORM III

3D Structure

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Related Domains

Browse other domains in RuBisCO_large →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRuBisCO_large(2002.1.1.1)

Ligands

in contact, ≤ 4 Å

AsparagineASN
drugDrugBank DB00174

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF00016RuBisCO_large

Ribulose bisphosphate carboxylase large chain, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3RUB RCSB PDB: 3RUB PDBe: 3RUB UniProt: P00876

Downloads

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Drug annotations from DrugDomain.